Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-poly-alpha-d-galacturonosidase | D5071_08610 | Not Available | Positive | 1854957 - 1856339 | 50127.3 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | D5071_08615 | Not Available | Negative | 1856639 - 1857118 | 17136.8 |
| conjugal transfer protein trab | D5071_08620 | Not Available | Negative | 1857189 - 1858007 | 30427.7 |
| copper-exporting p-type atpase copa | D5071_08625 | Not Available | Negative | 1858182 - 1860902 | 95800.0 |
| cu(i)-responsive transcriptional regulator | D5071_08630 | Not Available | Positive | 1861020 - 1861430 | 15553.6 |
| nfed family protein | D5071_08635 | Not Available | Negative | 1861464 - 1861919 | 16833.8 |
| spfh/band 7/phb domain protein | D5071_08640 | Not Available | Negative | 1861919 - 1862833 | 33673.1 |
| 2fe-2s ferredoxin-like protein | D5071_08645 | Not Available | Negative | 1862975 - 1863235 | 9491.4 |
| ribonucleotide-diphosphate reductase subunit beta | D5071_08650 | Not Available | Negative | 1863239 - 1864369 | 43495.7 |
| ribonucleoside-diphosphate reductase subunit alpha | D5071_08655 | Not Available | Negative | 1864497 - 1866782 | 85355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
