Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein aaex | D5071_08560 | Not Available | Positive | 1842963 - 1843166 | 7756.87 |
| p-hydroxybenzoic acid efflux pump subunit aaea | D5071_08565 | Not Available | Positive | 1843174 - 1844139 | 35598.8 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | D5071_08570 | Not Available | Positive | 1844151 - 1846139 | 73204.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | D5071_08575 | Not Available | Positive | 1846278 - 1847732 | 52020.1 |
| ribosome-associated protein | D5071_08580 | Not Available | Negative | 1847841 - 1848392 | 21310.2 |
| discoidin domain-containing protein | D5071_08585 | Not Available | Positive | 1848745 - 1850206 | 52193.6 |
| carbon starvation protein a | D5071_08590 | Not Available | Positive | 1850499 - 1852652 | 76554.5 |
| duf466 domain-containing protein | D5071_08595 | Not Available | Positive | 1852798 - 1853001 | 7612.13 |
| gtpase | D5071_08600 | Not Available | Positive | 1853018 - 1854004 | 36482.6 |
| hypothetical protein | D5071_08605 | Not Available | Positive | 1854344 - 1854742 | 15280.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
