Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | D5071_00280 | Not Available | Negative | 50645 - 51010 | 12353.9 |
| 50s ribosomal protein l10 | D5071_00285 | Not Available | Negative | 51077 - 51574 | 17781.7 |
| 50s ribosomal protein l1 | D5071_00290 | Not Available | Negative | 51890 - 52594 | 24738.0 |
| 50s ribosomal protein l11 | D5071_00295 | Not Available | Negative | 52598 - 53026 | 14740.0 |
| transcription termination/antitermination protein nusg | D5071_00300 | Not Available | Negative | 53189 - 53734 | 20558.7 |
| preprotein translocase subunit sece | D5071_00305 | Not Available | Negative | 53736 - 54119 | 13737.2 |
| elongation factor tu | D5071_00310 | Not Available | Negative | 54252 - 54353 | 3866.64 |
| elongation factor tu | D5071_00315 | Not Available | Negative | 54357 - 54436 | 2528.07 |
| mfs transporter | D5071_00320 | Not Available | Positive | 54761 - 56041 | 46405.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | D5071_00325 | Not Available | Negative | 56149 - 57504 | 52628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
