Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asch domain-containing protein | D5071_08410 | Not Available | Positive | 1811743 - 1812144 | 15035.7 |
| hypothetical protein | D5071_08415 | Not Available | Positive | 1812366 - 1813346 | 37212.1 |
| hypothetical protein | D5071_08420 | Not Available | Negative | 1813533 - 1813718 | 6938.31 |
| host cell division inhibitor icd-like protein | D5071_08425 | Not Available | Positive | 1813907 - 1814095 | 7085.49 |
| hypothetical protein | D5071_08430 | Not Available | Positive | 1814088 - 1814279 | 7242.48 |
| dna-binding transcriptional regulator fis | D5071_08435 | Not Available | Negative | 1814394 - 1814690 | 11169.6 |
| trna dihydrouridine synthase dusb | D5071_08440 | Not Available | Negative | 1814714 - 1815679 | 35487.9 |
| carbonic anhydrase family protein | D5071_08445 | Not Available | Negative | 1816036 - 1816770 | 26860.9 |
| 50s ribosomal protein l11 methyltransferase | D5071_08450 | Not Available | Negative | 1816946 - 1817833 | 32092.1 |
| sodium/pantothenate symporter | D5071_08455 | Not Available | Negative | 1817851 - 1819302 | 51701.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
