Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 1 protein | D5071_08360 | Not Available | Negative | 1800178 - 1801605 | 53399.2 |
| pts beta-glucoside transporter subunit eiibca | D5071_08365 | Not Available | Negative | 1801671 - 1803575 | 66678.9 |
| transketolase | D5071_08370 | Not Available | Negative | 1803874 - 1803983 | 3717.44 |
| amino acid abc transporter atp-binding protein | D5071_08375 | Not Available | Negative | 1804232 - 1804993 | 28626.7 |
| amino acid abc transporter permease | D5071_08380 | Not Available | Negative | 1805002 - 1806096 | 40941.0 |
| amino acid abc transporter permease | D5071_08385 | Not Available | Negative | 1806106 - 1807284 | 43375.8 |
| amino acid abc transporter substrate-binding protein | D5071_08390 | Not Available | Negative | 1807351 - 1808376 | 37003.1 |
| amino acid abc transporter permease | D5071_08395 | Not Available | Negative | 1808738 - 1809403 | 24519.7 |
| amino acid abc transporter substrate-binding protein | D5071_08400 | Not Available | Negative | 1809446 - 1810213 | 27633.8 |
| endonuclease | D5071_08405 | Not Available | Positive | 1810529 - 1811674 | 43566.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
