Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | D5071_08310 | Not Available | Positive | 1788840 - 1789643 | 29144.1 |
| hypothetical protein | D5071_08315 | Not Available | Positive | 1789682 - 1790566 | 33834.5 |
| gdp-mannose pyrophosphatase nudk | D5071_08320 | Not Available | Positive | 1790786 - 1791367 | 21780.9 |
| extracellular solute-binding protein | D5071_08325 | Not Available | Positive | 1791749 - 1793014 | 46301.3 |
| sugar abc transporter permease | D5071_08330 | Not Available | Positive | 1793078 - 1793959 | 33116.3 |
| carbohydrate abc transporter permease | D5071_08335 | Not Available | Positive | 1793961 - 1794773 | 30357.9 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | D5071_08340 | Not Available | Positive | 1794810 - 1795895 | 40179.7 |
| exotoxin | D5071_08345 | Not Available | Positive | 1796107 - 1797630 | 56377.2 |
| laci family dna-binding transcriptional regulator | D5071_08350 | Not Available | Negative | 1797897 - 1798934 | 38926.8 |
| prd domain-containing protein | D5071_08355 | Not Available | Negative | 1799161 - 1800030 | 33644.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
