Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 105 protein | D5071_08150 | Not Available | Positive | 1760223 - 1761362 | 44112.5 |
| divalent metal cation transporter | D5071_08265 | Not Available | Positive | 1779737 - 1780975 | 43966.2 |
| 4-oxalocrotonate tautomerase family protein | D5071_08270 | Not Available | Negative | 1781042 - 1781245 | 7390.96 |
| mfs transporter | D5071_08275 | Not Available | Negative | 1781259 - 1782425 | 41775.5 |
| phosphoenolpyruvate synthase | D5071_08280 | Not Available | Positive | 1783215 - 1785521 | 86340.1 |
| hypothetical protein | D5071_08285 | Not Available | Positive | 1785518 - 1786132 | 23290.2 |
| phosphocholine cytidylyltransferase family protein | D5071_08290 | Not Available | Positive | 1786120 - 1786917 | 29215.8 |
| hypothetical protein | D5071_08295 | Not Available | Positive | 1787123 - 1787779 | 25700.4 |
| cyth domain-containing protein | D5071_08300 | Not Available | Positive | 1787776 - 1788258 | 18865.6 |
| hypothetical protein | D5071_08305 | Not Available | Positive | 1788258 - 1788839 | 22224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
