Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp diphosphokinase | D5071_08100 | Not Available | Positive | 1744664 - 1746898 | 84083.4 |
| nucleoside triphosphate pyrophosphohydrolase | D5071_08105 | Not Available | Positive | 1747329 - 1748126 | 30233.6 |
| ctp synthase (glutamine hydrolyzing) | D5071_08110 | Not Available | Positive | 1748353 - 1749990 | 60118.6 |
| enolase | D5071_08115 | Not Available | Positive | 1750089 - 1751384 | 45229.0 |
| tonb-dependent siderophore receptor | D5071_08120 | Not Available | Positive | 1751769 - 1753955 | 79638.2 |
| abc transporter substrate-binding protein | D5071_08125 | Not Available | Positive | 1753961 - 1755037 | 40354.2 |
| type 1 glutamine amidotransferase domain-containing protein | D5071_08130 | Not Available | Negative | 1755128 - 1755805 | 24322.9 |
| coniferyl aldehyde dehydrogenase | D5071_08135 | Not Available | Negative | 1755853 - 1757271 | 51501.6 |
| lysr family transcriptional regulator | D5071_08140 | Not Available | Positive | 1757428 - 1758318 | 32432.3 |
| mfs transporter | D5071_08145 | Not Available | Positive | 1758620 - 1760179 | 57730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
