Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | D5071_08050 | Not Available | Negative | 1727730 - 1729220 | 54215.1 |
| galactarate dehydratase | D5071_08055 | Not Available | Negative | 1729931 - 1731505 | 56197.3 |
| mfs transporter | D5071_08060 | Not Available | Positive | 1732049 - 1733401 | 49204.9 |
| glucarate dehydratase | D5071_08065 | Not Available | Positive | 1734019 - 1735371 | 49607.6 |
| glucarate dehydratase | D5071_08070 | Not Available | Positive | 1735408 - 1736748 | 49210.0 |
| 2-dehydro-3-deoxyglucarate aldolase | D5071_08075 | Not Available | Positive | 1736818 - 1737588 | 27689.2 |
| 2-hydroxy-3-oxopropionate reductase | D5071_08080 | Not Available | Positive | 1737678 - 1738562 | 30382.3 |
| glycerate kinase | D5071_08085 | Not Available | Positive | 1738740 - 1739885 | 40012.9 |
| two-component sensor histidine kinase bara | D5071_08090 | Not Available | Negative | 1740348 - 1743143 | 104520.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | D5071_08095 | Not Available | Positive | 1743261 - 1744610 | 49592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
