Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | D5071_08000 | Not Available | Positive | 1715087 - 1715905 | 30125.2 |
| multifunctional cca addition/repair protein | D5071_08005 | Not Available | Negative | 1715974 - 1717218 | 46355.5 |
| sh3 domain-containing protein | D5071_08010 | Not Available | Negative | 1717327 - 1717947 | 23225.9 |
| inorganic triphosphatase | D5071_08015 | Not Available | Positive | 1718269 - 1719606 | 50634.1 |
| bifunctional | D5071_08020 | Not Available | Positive | 1719660 - 1722515 | 108030.0 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | D5071_08025 | Not Available | Positive | 1722636 - 1724072 | 50960.5 |
| nad-dependent dna ligase liga | D5071_08030 | Not Available | Positive | 1724208 - 1726262 | 74794.9 |
| cytoplasmic protein | D5071_08035 | Not Available | Positive | 1726267 - 1726488 | 8493.62 |
| hypothetical protein | D5071_08040 | Not Available | Negative | 1726581 - 1726937 | 12837.6 |
| hypothetical protein | D5071_08045 | Not Available | Negative | 1727136 - 1727561 | 14901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
