Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | D5071_07950 | Not Available | Negative | 1702487 - 1703812 | 49040.9 |
| peptide-methionine (s)-s-oxide reductase msra | D5071_07955 | Not Available | Negative | 1703964 - 1704602 | 23679.7 |
| outer membrane protein assembly factor | D5071_07960 | Not Available | Positive | 1705062 - 1706777 | 63940.3 |
| translocation/assembly module tamb | D5071_07965 | Not Available | Positive | 1706774 - 1710811 | 144710.0 |
| gamma-glutamylcyclotransferase | D5071_07970 | Not Available | Positive | 1710814 - 1711170 | 13522.0 |
| inorganic diphosphatase | D5071_07975 | Not Available | Negative | 1711286 - 1711816 | 19661.5 |
| methyl-accepting chemotaxis protein | D5071_07980 | Not Available | Positive | 1712065 - 1713651 | 56286.8 |
| hypothetical protein | D5071_07985 | Not Available | Positive | 1713679 - 1713927 | 9430.74 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | D5071_07990 | Not Available | Negative | 1713822 - 1714457 | 22865.3 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | D5071_07995 | Not Available | Positive | 1714586 - 1714939 | 13247.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
