Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | D5071_00235 | Not Available | Positive | 35342 - 36121 | 27325.0 |
| sulfur carrier protein this | D5071_00240 | Not Available | Positive | 36118 - 36318 | 7197.58 |
| thiazole synthase | D5071_00245 | Not Available | Positive | 36320 - 37102 | 27411.5 |
| 2-iminoacetate synthase thih | D5071_00250 | Not Available | Positive | 37102 - 38223 | 42575.8 |
| plp-dependent aminotransferase family protein | D5071_00255 | Not Available | Negative | 38504 - 39928 | 53374.7 |
| duf1127 domain-containing protein | D5071_00260 | Not Available | Positive | 40102 - 40293 | 7793.55 |
| shikimate transporter | D5071_00265 | Not Available | Negative | 40391 - 41788 | 50423.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 41887 - 42263 | Not Available |
| dna-directed rna polymerase subunit beta' | D5071_00270 | Not Available | Negative | 41959 - 46182 | 155263.0 |
| dna-directed rna polymerase subunit beta | D5071_00275 | Not Available | Negative | 46289 - 50317 | 150736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
