Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1007 family protein | D5071_07850 | Not Available | Negative | 1668732 - 1669391 | 24542.4 |
| 3-phenylpropionate mfs transporter | D5071_07855 | Not Available | Negative | 1669435 - 1670595 | 42041.7 |
| serine hydroxymethyltransferase | D5071_07860 | Not Available | Negative | 1670895 - 1672148 | 45314.2 |
| no-inducible flavohemoprotein | D5071_07865 | Not Available | Positive | 1672508 - 1673698 | 44198.4 |
| hypothetical protein | D5071_07870 | Not Available | Negative | 1674185 - 1679773 | 212273.0 |
| rhamnogalacturonan acetylesterase | D5071_07875 | Not Available | Positive | 1680472 - 1682130 | 60251.0 |
| pectinesterase a | D5071_07880 | Not Available | Positive | 1682218 - 1683324 | 40330.4 |
| nitrogen regulatory protein p-ii | D5071_07885 | Not Available | Negative | 1683503 - 1683841 | 12448.1 |
| two-component system response regulator glrr | D5071_07890 | Not Available | Negative | 1683949 - 1685286 | 49275.7 |
| two-component system qseef-associated lipoprotein qseg | D5071_07895 | Not Available | Negative | 1685283 - 1686134 | 32095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
