Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase (glutaredoxin) | D5071_07800 | Not Available | Positive | 1658297 - 1658668 | 13639.6 |
| dnaa inactivator hda | D5071_07805 | Not Available | Negative | 1658730 - 1659437 | 26853.2 |
| uracil permease | D5071_07810 | Not Available | Negative | 1659536 - 1660825 | 44927.7 |
| uracil phosphoribosyltransferase | D5071_07815 | Not Available | Negative | 1661054 - 1661680 | 22511.7 |
| phosphoribosylformylglycinamidine cyclo-ligase | D5071_07820 | Not Available | Positive | 1662018 - 1663055 | 36817.0 |
| phosphoribosylglycinamide formyltransferase | D5071_07825 | Not Available | Positive | 1663055 - 1663693 | 23462.0 |
| hypothetical protein | D5071_07830 | Not Available | Negative | 1663869 - 1664192 | 12619.2 |
| hamp domain-containing protein | D5071_07835 | Not Available | Negative | 1664278 - 1665945 | 59701.7 |
| abc transporter substrate-binding protein | D5071_07840 | Not Available | Negative | 1666392 - 1667519 | 42144.8 |
| nickel/cobalt transporter | D5071_07845 | Not Available | Negative | 1667638 - 1668741 | 40191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
