Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | D5071_07690 | Not Available | Negative | 1632704 - 1634494 | 67183.0 |
| tonb-dependent siderophore receptor | D5071_07695 | Not Available | Negative | 1634556 - 1636934 | 85841.1 |
| sigma-70 family rna polymerase sigma factor | D5071_07700 | Not Available | Positive | 1637426 - 1637947 | 19836.7 |
| fecr family protein | D5071_07705 | Not Available | Positive | 1637975 - 1638928 | 35009.9 |
| energy transducer tonb | D5071_07710 | Not Available | Positive | 1639046 - 1639921 | 31038.4 |
| mota/tolq/exbb proton channel family protein | D5071_07715 | Not Available | Positive | 1640000 - 1640740 | 26811.4 |
| biopolymer transporter exbd | D5071_07720 | Not Available | Positive | 1640755 - 1641177 | 15363.7 |
| peptidase u62 | D5071_07725 | Not Available | Positive | 1641338 - 1642702 | 48451.1 |
| metalloprotease tldd | D5071_07730 | Not Available | Positive | 1642738 - 1644183 | 51451.8 |
| thioredoxin | D5071_07735 | Not Available | Positive | 1644231 - 1645496 | 47395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
