Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_07485 | Not Available | Positive | 1591206 - 1591412 | 7701.12 |
| hypothetical protein | D5071_07490 | Not Available | Positive | 1591999 - 1592388 | 15277.2 |
| hypothetical protein | D5071_07500 | Not Available | Positive | 1594122 - 1594718 | 21366.8 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | D5071_07505 | Not Available | Negative | 1594741 - 1595907 | 43020.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | D5071_07510 | Not Available | Positive | 1596135 - 1597559 | 53624.3 |
| phoh family protein | D5071_07515 | Not Available | Positive | 1597816 - 1598874 | 39573.5 |
| rrna maturation rnase ybey | D5071_07520 | Not Available | Positive | 1598871 - 1599350 | 18175.3 |
| magnesium/cobalt transporter corc | D5071_07525 | Not Available | Positive | 1599602 - 1600480 | 33397.6 |
| apolipoprotein n-acyltransferase | D5071_07530 | Not Available | Positive | 1600488 - 1602017 | 56789.5 |
| amino acid abc transporter substrate-binding protein | D5071_07535 | Not Available | Positive | 1602467 - 1603363 | 32966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
