Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase/penicillin-binding protein 1a | D5071_07435 | Not Available | Positive | 1578734 - 1581289 | 93041.0 |
| duf1593 domain-containing protein | D5071_07440 | Not Available | Negative | 1581409 - 1582833 | 52501.2 |
| adp compounds hydrolase nude | D5071_07445 | Not Available | Negative | 1583065 - 1583622 | 21191.7 |
| hypothetical protein | D5071_07450 | Not Available | Negative | 1583640 - 1583822 | 6748.16 |
| intracellular growth attenuator family protein | D5071_07455 | Not Available | Positive | 1584060 - 1586207 | 79980.2 |
| gmp/imp nucleotidase | D5071_07460 | Not Available | Positive | 1586325 - 1587011 | 26317.1 |
| ribosome-associated heat shock protein hsp15 | D5071_07465 | Not Available | Positive | 1587130 - 1587540 | 15742.8 |
| hsp33 family molecular chaperone hslo | D5071_07470 | Not Available | Positive | 1587656 - 1588525 | 32370.2 |
| phosphoenolpyruvate carboxykinase (atp) | D5071_07475 | Not Available | Positive | 1588723 - 1590342 | 59402.2 |
| Trna-gln | Not Available | Not Available | Positive | 1590612 - 1590688 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
