Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | D5071_07220 | Not Available | Negative | 1535220 - 1535627 | 14622.8 |
| camp-activated global transcriptional regulator crp | D5071_07225 | Not Available | Positive | 1536002 - 1536634 | 23572.8 |
| aspartate aminotransferase family protein | D5071_07230 | Not Available | Negative | 1536781 - 1538007 | 43875.7 |
| aminodeoxychorismate synthase component ii | D5071_07235 | Not Available | Negative | 1538127 - 1538702 | 21236.6 |
| type ii toxin-antitoxin system rele/pare family toxin | D5071_07240 | Not Available | Positive | 1539305 - 1539664 | 13618.5 |
| dna-binding transcriptional regulator | D5071_07245 | Not Available | Positive | 1539648 - 1539971 | 11814.4 |
| atp-binding protein | D5071_07250 | Not Available | Positive | 1540179 - 1541417 | 47696.6 |
| tigr02646 family protein | D5071_07255 | Not Available | Positive | 1541410 - 1542168 | 28896.2 |
| hypothetical protein | D5071_07265 | Not Available | Negative | 1543258 - 1543512 | 9440.44 |
| pectate lyase | D5071_07270 | Not Available | Positive | 1544369 - 1545493 | 40240.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
