Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysis protein | D5071_07170 | Not Available | Positive | 1526407 - 1526625 | 8506.97 |
| peptidylprolyl isomerase | D5071_07175 | Not Available | Negative | 1526742 - 1527326 | 20693.8 |
| yhev family putative metal-binding protein | D5071_07180 | Not Available | Negative | 1527447 - 1527653 | 7355.85 |
| glutathione-regulated potassium-efflux system protein kefb | D5071_07185 | Not Available | Negative | 1527666 - 1529477 | 66540.8 |
| glutathione-regulated potassium-efflux system ancillary protein kefg | D5071_07190 | Not Available | Negative | 1529479 - 1530033 | 21373.6 |
| abc transporter atp-binding protein | D5071_07195 | Not Available | Positive | 1530156 - 1532063 | 71432.3 |
| lyse family translocator | D5071_07200 | Not Available | Negative | 1532130 - 1532732 | 21842.8 |
| hydrolase | D5071_07205 | Not Available | Positive | 1532839 - 1533879 | 39211.2 |
| yheu family protein | D5071_07210 | Not Available | Positive | 1533876 - 1534112 | 8934.51 |
| phosphoribulokinase | D5071_07215 | Not Available | Positive | 1534237 - 1535106 | 32613.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
