Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase complex subunit tusc | D5071_07120 | Not Available | Negative | 1516326 - 1516685 | 13284.1 |
| sulfurtransferase complex subunit tusd | D5071_07125 | Not Available | Negative | 1516695 - 1517084 | 13895.6 |
| transcriptional regulator | D5071_07130 | Not Available | Negative | 1517084 - 1517818 | 27133.3 |
| phosphoethanolamine transferase epta | D5071_07135 | Not Available | Positive | 1517985 - 1519631 | 61265.3 |
| two-component system response regulator pmra | D5071_07140 | Not Available | Positive | 1519628 - 1520296 | 24865.8 |
| two-component system sensor histidine kinase pmrb | D5071_07145 | Not Available | Positive | 1520293 - 1521387 | 41159.9 |
| serine hydroxymethyltransferase | D5071_07150 | Not Available | Negative | 1521456 - 1522727 | 46392.2 |
| yggs family pyridoxal phosphate-dependent enzyme | D5071_07155 | Not Available | Negative | 1522760 - 1523572 | 30050.9 |
| plp-dependent aminotransferase family protein | D5071_07160 | Not Available | Positive | 1523676 - 1525169 | 54570.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D5071_07165 | Not Available | Negative | 1525306 - 1526124 | 28934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
