Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | D5071_07065 | Not Available | Positive | 1505171 - 1506841 | 59663.0 |
| methyl-accepting chemotaxis protein | D5071_07070 | Not Available | Positive | 1507553 - 1509223 | 59983.6 |
| hypothetical protein | D5071_07075 | Not Available | Positive | 1509544 - 1510167 | 23114.0 |
| hypothetical protein | D5071_07080 | Not Available | Positive | 1510152 - 1511165 | 38742.2 |
| hypothetical protein | D5071_07090 | Not Available | Positive | 1511524 - 1512611 | 40216.9 |
| elongation factor tu | D5071_07095 | Not Available | Negative | 1512612 - 1512672 | 2271.79 |
| elongation factor g | D5071_07100 | Not Available | Negative | 1512736 - 1514850 | 77456.5 |
| 30s ribosomal protein s7 | D5071_07105 | Not Available | Negative | 1514947 - 1515417 | 17625.4 |
| 30s ribosomal protein s12 | D5071_07110 | Not Available | Negative | 1515514 - 1515888 | 13684.8 |
| sulfurtransferase complex subunit tusb | D5071_07115 | Not Available | Negative | 1516020 - 1516307 | 10488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
