Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_07015 | Not Available | Positive | 1493867 - 1494637 | 28239.6 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | D5071_07020 | Not Available | Positive | 1494643 - 1495344 | 25667.1 |
| plp-dependent aminotransferase family protein | D5071_07025 | Not Available | Positive | 1495374 - 1496564 | 44141.3 |
| deor/glpr transcriptional regulator | D5071_07030 | Not Available | Negative | 1496601 - 1497362 | 27327.1 |
| nad(p)-dependent oxidoreductase | D5071_07035 | Not Available | Positive | 1497701 - 1498615 | 31657.3 |
| four-carbon acid sugar kinase family protein | D5071_07040 | Not Available | Positive | 1498612 - 1499886 | 45516.3 |
| aldolase | D5071_07045 | Not Available | Positive | 1499883 - 1500539 | 23800.4 |
| hydroxypyruvate isomerase | D5071_07050 | Not Available | Positive | 1500567 - 1501355 | 29273.8 |
| gntp family transporter | D5071_07055 | Not Available | Positive | 1501542 - 1502900 | 47039.9 |
| methyl-accepting chemotaxis protein | D5071_07060 | Not Available | Positive | 1503212 - 1504891 | 59256.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
