Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1145 family protein | D5071_06965 | Not Available | Negative | 1483899 - 1484177 | 10506.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | D5071_06970 | Not Available | Negative | 1484204 - 1484779 | 21332.6 |
| signal recognition particle-docking protein ftsy | D5071_06975 | Not Available | Positive | 1485129 - 1486622 | 54247.2 |
| cell division atp-binding protein ftse | D5071_06980 | Not Available | Positive | 1486628 - 1487299 | 24509.9 |
| cell division protein ftsx | D5071_06985 | Not Available | Positive | 1487289 - 1488257 | 35281.3 |
| rna polymerase sigma factor rpoh | D5071_06990 | Not Available | Positive | 1488613 - 1489470 | 32724.9 |
| aspartate 1-decarboxylase autocleavage activator panm | D5071_06995 | Not Available | Negative | 1489554 - 1490000 | 16875.5 |
| branched-chain amino acid abc transporter substrate-binding protein | D5071_07000 | Not Available | Positive | 1490405 - 1491517 | 39458.1 |
| high-affinity branched-chain amino acid abc transporter permease livh | D5071_07005 | Not Available | Positive | 1491673 - 1492599 | 32903.3 |
| high-affinity branched-chain amino acid abc transporter permease livm | D5071_07010 | Not Available | Positive | 1492596 - 1493870 | 46472.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
