Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| insulinase family protein | D5071_06915 | Not Available | Positive | 1472935 - 1474452 | 56313.2 |
| sugar kinase | D5071_06920 | Not Available | Negative | 1474535 - 1475467 | 34146.4 |
| inner membrane protein yhjd | D5071_06925 | Not Available | Negative | 1475636 - 1476652 | 37120.4 |
| mfs transporter | D5071_06930 | Not Available | Positive | 1476771 - 1477967 | 41462.9 |
| duf1795 domain-containing protein | D5071_06935 | Not Available | Negative | 1478262 - 1478828 | 20018.8 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | D5071_06940 | Not Available | Negative | 1479015 - 1479692 | 25690.7 |
| sulfurtransferase tusa | D5071_06945 | Not Available | Positive | 1479909 - 1480151 | 9184.19 |
| zinc/cadmium/mercury/lead-transporting atpase | D5071_06950 | Not Available | Negative | 1480211 - 1482574 | 82933.8 |
| lysoplasmalogenase | D5071_06955 | Not Available | Negative | 1482669 - 1483298 | 23768.9 |
| duf1820 family protein | D5071_06960 | Not Available | Positive | 1483490 - 1483810 | 11841.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
