Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_00120 | Not Available | Negative | 20865 - 21284 | 15742.6 |
| hypothetical protein | D5071_00125 | Not Available | Negative | 21287 - 21736 | 16553.1 |
| smi1/knr4 family protein | D5071_00130 | Not Available | Negative | 21811 - 22248 | 16087.2 |
| hypothetical protein | D5071_00140 | Not Available | Negative | 22893 - 23348 | 17250.1 |
| hypothetical protein | D5071_00145 | Not Available | Negative | 23357 - 23722 | 14150.8 |
| hypothetical protein | D5071_00150 | Not Available | Negative | 23719 - 24234 | 19138.7 |
| single-stranded dna-binding protein | D5071_00170 | Not Available | Positive | 25324 - 25824 | 18367.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 25713 - 25809 | Not Available |
| duf4160 domain-containing protein | D5071_00175 | Not Available | Positive | 26069 - 26311 | 9242.92 |
| duf2442 domain-containing protein | D5071_00180 | Not Available | Positive | 26295 - 26543 | 9449.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
