Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | D5071_06810 | Not Available | Negative | 1438027 - 1439100 | 39589.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | D5071_06815 | Not Available | Negative | 1439375 - 1440220 | 31701.9 |
| sn-glycerol 3-phosphate abc transporter permease | D5071_06820 | Not Available | Negative | 1440246 - 1441133 | 33009.8 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | D5071_06825 | Not Available | Negative | 1441206 - 1442540 | 48802.8 |
| valine--pyruvate transaminase | D5071_06830 | Not Available | Negative | 1442787 - 1444037 | 46426.3 |
| o-acetylserine/cysteine exporter | D5071_06835 | Not Available | Positive | 1444426 - 1445337 | 32605.6 |
| gamma-glutamyltransferase | D5071_06840 | Not Available | Positive | 1445551 - 1447329 | 62708.7 |
| hypothetical protein | D5071_06845 | Not Available | Negative | 1447378 - 1447761 | 14963.7 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D5071_06855 | Not Available | Negative | 1453066 - 1454748 | 61989.1 |
| cellulose biosynthesis protein bcsc | D5071_06860 | Not Available | Negative | 1455007 - 1458486 | 128757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
