Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase cpxa | D5071_06760 | Not Available | Positive | 1427146 - 1428516 | 51848.4 |
| hypothetical protein | D5071_06765 | Not Available | Positive | 1428710 - 1430884 | 80736.6 |
| duf3142 domain-containing protein | D5071_06770 | Not Available | Positive | 1430854 - 1431654 | 30257.1 |
| trna (cytidine(34)-2'-o)-methyltransferase | D5071_06775 | Not Available | Negative | 1431665 - 1432129 | 17335.5 |
| hypothetical protein | D5071_06780 | Not Available | Positive | 1432576 - 1433469 | 34199.6 |
| threonine/serine transporter | D5071_06785 | Not Available | Positive | 1433529 - 1434647 | 41196.1 |
| mbl fold metallo-hydrolase | D5071_06790 | Not Available | Negative | 1434651 - 1435451 | 29381.6 |
| hypothetical protein | D5071_06795 | Not Available | Positive | 1435749 - 1436045 | 11188.4 |
| aec family transporter | D5071_06800 | Not Available | Negative | 1436059 - 1437015 | 34049.3 |
| glycerophosphodiester phosphodiesterase | D5071_06805 | Not Available | Negative | 1437278 - 1438027 | 27245.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
