Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_06710 | Not Available | Positive | 1418393 - 1419478 | 43168.9 |
| duf1343 domain-containing protein | D5071_06715 | Not Available | Positive | 1419511 - 1420830 | 50156.1 |
| hypothetical protein | D5071_06720 | Not Available | Negative | 1421086 - 1421418 | 12457.5 |
| hypothetical protein | D5071_06725 | Not Available | Negative | 1421646 - 1421894 | 9478.81 |
| atp-dependent 6-phosphofructokinase | D5071_06730 | Not Available | Negative | 1422031 - 1422993 | 34931.1 |
| cdf family cation-efflux pump fief | D5071_06735 | Not Available | Negative | 1423200 - 1424102 | 32945.2 |
| sugar transporter | D5071_06740 | Not Available | Negative | 1424186 - 1425373 | 42081.3 |
| hypothetical protein | D5071_06745 | Not Available | Positive | 1425619 - 1425837 | 8185.82 |
| periplasmic heavy metal sensor | D5071_06750 | Not Available | Negative | 1425773 - 1426297 | 19610.6 |
| dna-binding transcriptional regulator cpxr | D5071_06755 | Not Available | Positive | 1426451 - 1427149 | 26361.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
