Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hslu--hslv peptidase proteolytic subunit | D5071_06605 | Not Available | Positive | 1397223 - 1397753 | 18985.8 |
| hslu--hslv peptidase atpase subunit | D5071_06610 | Not Available | Positive | 1397763 - 1399094 | 49627.6 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | D5071_06615 | Not Available | Positive | 1399239 - 1400156 | 32719.7 |
| ribonuclease e activity regulator rraa | D5071_06620 | Not Available | Positive | 1400291 - 1400776 | 17315.4 |
| cell division protein zapb | D5071_06625 | Not Available | Negative | 1400895 - 1401134 | 9131.89 |
| hypothetical protein | D5071_06630 | Not Available | Negative | 1401358 - 1401633 | 10571.3 |
| aquaporin | D5071_06635 | Not Available | Positive | 1401706 - 1402545 | 29450.4 |
| glycerol kinase | D5071_06640 | Not Available | Positive | 1402599 - 1404110 | 55745.2 |
| class ii fructose-bisphosphatase | D5071_06645 | Not Available | Positive | 1404365 - 1405375 | 35999.8 |
| ferredoxin--nadp(+) reductase | D5071_06650 | Not Available | Positive | 1405493 - 1406239 | 27748.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
