Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | D5071_06555 | Not Available | Negative | 1386798 - 1387958 | 41368.3 |
| met repressor | D5071_06560 | Not Available | Positive | 1388146 - 1388463 | 12182.5 |
| abc transporter atp-binding protein | D5071_06565 | Not Available | Positive | 1388698 - 1389495 | 28894.2 |
| abc transporter substrate-binding protein | D5071_06570 | Not Available | Positive | 1389505 - 1390467 | 35399.5 |
| iron abc transporter permease | D5071_06575 | Not Available | Positive | 1390464 - 1391474 | 34893.9 |
| type ii toxin-antitoxin system hicb family antitoxin | D5071_06580 | Not Available | Positive | 1391614 - 1392024 | 14507.2 |
| 50s ribosomal protein l31 | D5071_06585 | Not Available | Negative | 1392136 - 1392351 | 7755.31 |
| primosomal protein n' | D5071_06590 | Not Available | Positive | 1392625 - 1394823 | 81702.7 |
| dna-binding transcriptional regulator cytr | D5071_06595 | Not Available | Positive | 1395132 - 1396175 | 38611.5 |
| cell division protein ftsn | D5071_06600 | Not Available | Positive | 1396264 - 1397139 | 31856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
