Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| si-specific nad(p)(+) transhydrogenase | D5071_06505 | Not Available | Positive | 1373502 - 1374908 | 51556.3 |
| dna-binding transcriptional regulator oxyr | D5071_06510 | Not Available | Negative | 1374900 - 1375808 | 34192.8 |
| methylenetetrahydrofolate reductase | D5071_06515 | Not Available | Negative | 1376444 - 1377340 | 33535.0 |
| phosphodiesterase | D5071_06520 | Not Available | Negative | 1377843 - 1378604 | 27547.4 |
| laci family dna-binding transcriptional regulator | D5071_06525 | Not Available | Negative | 1378653 - 1379657 | 35209.2 |
| abc transporter permease subunit | D5071_06530 | Not Available | Negative | 1379654 - 1380460 | 29409.9 |
| sugar abc transporter permease | D5071_06535 | Not Available | Negative | 1380457 - 1381296 | 30122.0 |
| extracellular solute-binding protein | D5071_06540 | Not Available | Negative | 1381549 - 1382682 | 41105.5 |
| abc transporter atp-binding protein | D5071_06545 | Not Available | Negative | 1382705 - 1383871 | 42112.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | D5071_06550 | Not Available | Negative | 1384360 - 1386795 | 88839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
