Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D5071_00065 | Not Available | Negative | 12614 - 13573 | 34447.0 |
| abc transporter substrate-binding protein | D5071_00070 | Not Available | Negative | 13551 - 15164 | 58704.4 |
| duf1440 domain-containing protein | D5071_00075 | Not Available | Positive | 15811 - 16425 | 23061.2 |
| hypothetical protein | D5071_00080 | Not Available | Negative | 16613 - 16960 | 13087.3 |
| duf4265 domain-containing protein | D5071_00085 | Not Available | Negative | 17042 - 17506 | 17544.5 |
| hypothetical protein | D5071_00090 | Not Available | Negative | 17625 - 18011 | 14140.3 |
| hypothetical protein | D5071_00095 | Not Available | Negative | 18050 - 18445 | 15013.0 |
| hypothetical protein | D5071_00100 | Not Available | Positive | 18701 - 19366 | 24871.4 |
| smi1/knr4 family protein | D5071_00110 | Not Available | Positive | 20055 - 20483 | 15970.7 |
| hypothetical protein | D5071_00115 | Not Available | Negative | 20515 - 20844 | 12602.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
