Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone osmy | D5071_06355 | Not Available | Positive | 1342376 - 1342984 | 20860.7 |
| duf1328 domain-containing protein | D5071_06360 | Not Available | Positive | 1343138 - 1343299 | 5506.17 |
| stress-response protein | D5071_06365 | Not Available | Positive | 1343451 - 1343639 | 7079.12 |
| metal-dependent hydrolase | D5071_06370 | Not Available | Positive | 1343754 - 1344551 | 30188.4 |
| nupc/nupg family nucleoside cnt transporter | D5071_06375 | Not Available | Positive | 1344855 - 1346132 | 44672.8 |
| 4'-phosphopantetheinyl transferase superfamily protein | D5071_06380 | Not Available | Positive | 1346283 - 1346999 | 27148.1 |
| tonb-dependent receptor | D5071_06385 | Not Available | Negative | 1347051 - 1349021 | 73050.6 |
| 4fe-4s binding protein | D5071_06390 | Not Available | Negative | 1349410 - 1350519 | 41628.0 |
| hamp domain-containing protein | D5071_06395 | Not Available | Negative | 1350662 - 1352335 | 61475.6 |
| ycii family protein | D5071_06400 | Not Available | Negative | 1352467 - 1352763 | 10646.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
