Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | D5071_06300 | Not Available | Negative | 1330978 - 1332303 | 49742.3 |
| yeca family protein | D5071_06305 | Not Available | Negative | 1332361 - 1332948 | 21845.5 |
| cell division protein zapa | D5071_06310 | Not Available | Positive | 1333141 - 1333470 | 12524.9 |
| 5-formyltetrahydrofolate cyclo-ligase | D5071_06320 | Not Available | Positive | 1333768 - 1334409 | 24640.7 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | D5071_06325 | Not Available | Negative | 1334406 - 1335659 | 48171.1 |
| dna repair protein rada | D5071_06330 | Not Available | Negative | 1335778 - 1337160 | 49593.2 |
| phosphoserine phosphatase | D5071_06335 | Not Available | Negative | 1337178 - 1338155 | 35219.7 |
| ytjb family periplasmic protein | D5071_06340 | Not Available | Positive | 1338310 - 1339008 | 25959.3 |
| hypothetical protein | D5071_06345 | Not Available | Negative | 1339057 - 1339989 | 34102.2 |
| peptide chain release factor 3 | D5071_06350 | Not Available | Positive | 1340281 - 1341870 | 59715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
