Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_06245 | Not Available | Negative | 1319545 - 1319730 | 6675.62 |
| l-rhamnose/proton symporter rhat | D5071_06250 | Not Available | Negative | 1319837 - 1320871 | 37443.2 |
| tigr00645 family protein | D5071_06255 | Not Available | Positive | 1321197 - 1321703 | 18928.8 |
| nadp-dependent oxidoreductase | D5071_06260 | Not Available | Positive | 1321798 - 1322835 | 37456.0 |
| arac family transcriptional regulator | D5071_06265 | Not Available | Positive | 1322923 - 1323747 | 31397.9 |
| aspartate aminotransferase family protein | D5071_06270 | Not Available | Positive | 1323947 - 1325317 | 49621.9 |
| iron-containing alcohol dehydrogenase | D5071_06275 | Not Available | Positive | 1325328 - 1326482 | 41345.9 |
| apc family permease | D5071_06280 | Not Available | Positive | 1326567 - 1327970 | 50030.4 |
| fad-dependent 2-octaprenylphenol hydroxylase | D5071_06290 | Not Available | Negative | 1328497 - 1329708 | 44525.7 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | D5071_06295 | Not Available | Negative | 1329737 - 1330915 | 42915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
