Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 65 protein | D5071_06075 | Not Available | Negative | 1277427 - 1280132 | 103507.0 |
| pts trehalose transporter subunit iibc | D5071_06080 | Not Available | Negative | 1280162 - 1281601 | 52500.6 |
| hth-type transcriptional regulator trer | D5071_06085 | Not Available | Negative | 1281737 - 1282678 | 35047.6 |
| 6-phospho-beta-glucosidase | D5071_06090 | Not Available | Negative | 1282842 - 1284230 | 52927.3 |
| duf1543 domain-containing protein | D5071_06095 | Not Available | Positive | 1284617 - 1285108 | 17896.1 |
| sulfite reductase subunit alpha | D5071_06100 | Not Available | Positive | 1285527 - 1289741 | 153347.0 |
| type 1 glutamine amidotransferase domain-containing protein | D5071_06105 | Not Available | Negative | 1289826 - 1290599 | 27874.7 |
| lysr family transcriptional regulator | D5071_06110 | Not Available | Positive | 1290782 - 1291684 | 33346.3 |
| lysozyme | D5071_06115 | Not Available | Negative | 1291998 - 1292459 | 17077.5 |
| hypothetical protein | D5071_06120 | Not Available | Positive | 1293385 - 1293720 | 11905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
