Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envz/ompr regulon moderator mzra | D5071_05975 | Not Available | Negative | 1252496 - 1252891 | 14593.9 |
| deda family protein | D5071_05980 | Not Available | Negative | 1252894 - 1253577 | 25653.1 |
| transcriptional regulator exur | D5071_05985 | Not Available | Negative | 1254079 - 1254855 | 30228.0 |
| mfs transporter | D5071_05990 | Not Available | Negative | 1255065 - 1256366 | 47125.4 |
| glucuronate isomerase | D5071_05995 | Not Available | Positive | 1256781 - 1258190 | 54035.3 |
| tagaturonate reductase | D5071_06000 | Not Available | Positive | 1258393 - 1259859 | 55614.2 |
| altronate dehydratase | D5071_06005 | Not Available | Positive | 1259879 - 1261369 | 54567.0 |
| ygjv family protein | D5071_06010 | Not Available | Positive | 1261458 - 1261988 | 19518.2 |
| serine/threonine transporter sstt | D5071_06015 | Not Available | Negative | 1262072 - 1263319 | 43153.0 |
| terc family protein | D5071_06020 | Not Available | Negative | 1263667 - 1264620 | 35592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
