Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | D5071_05925 | Not Available | Positive | 1246441 - 1246650 | 8343.66 |
| transcriptional regulator zur | D5071_05930 | Not Available | Negative | 1246706 - 1247215 | 19087.7 |
| pirin family protein | D5071_05935 | Not Available | Negative | 1247340 - 1248038 | 25805.5 |
| lysr family transcriptional regulator | D5071_05940 | Not Available | Positive | 1248152 - 1249048 | 33507.7 |
| glutathione s-transferase family protein | D5071_05945 | Not Available | Negative | 1249129 - 1250124 | 37594.1 |
| doxx family protein | D5071_05950 | Not Available | Negative | 1250233 - 1250628 | 14031.8 |
| cell division protein ftsh | D5071_05955 | Not Available | Negative | 1250903 - 1251193 | 11718.3 |
| hypothetical protein | D5071_05960 | Not Available | Negative | 1251190 - 1251585 | 14277.0 |
| duf883 domain-containing protein | D5071_05965 | Not Available | Negative | 1251604 - 1251909 | 11041.0 |
| duf1090 domain-containing protein | D5071_05970 | Not Available | Negative | 1252086 - 1252490 | 14908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
