Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter | D5071_05870 | Not Available | Negative | 1234194 - 1235495 | 45435.4 |
| aspartate ammonia-lyase | D5071_05875 | Not Available | Negative | 1235617 - 1237056 | 52645.5 |
| membrane protein fxsa | D5071_05880 | Not Available | Positive | 1237563 - 1238045 | 17416.8 |
| co-chaperone groes | D5071_05885 | Not Available | Positive | 1238244 - 1238564 | 11401.9 |
| chaperonin groel | D5071_05890 | Not Available | Positive | 1238610 - 1240256 | 57054.9 |
| 4-hydroxybenzoate octaprenyltransferase | D5071_05900 | Not Available | Positive | 1241064 - 1241927 | 31648.5 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | D5071_05905 | Not Available | Negative | 1242066 - 1244579 | 94848.1 |
| hypothetical protein | D5071_05910 | Not Available | Positive | 1244649 - 1244894 | 9165.71 |
| diacylglycerol kinase | D5071_05915 | Not Available | Positive | 1244908 - 1245273 | 13138.5 |
| repressor lexa | D5071_05920 | Not Available | Positive | 1245384 - 1245992 | 22300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
