Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_05820 | Not Available | Negative | 1223817 - 1224365 | 20146.2 |
| hypothetical protein | D5071_05825 | Not Available | Negative | 1224501 - 1225124 | 23298.4 |
| conjugal transfer protein traf | D5071_05830 | Not Available | Negative | 1225251 - 1226450 | 41984.6 |
| hypothetical protein | D5071_05835 | Not Available | Negative | 1226643 - 1227596 | 36145.3 |
| hypothetical protein | D5071_05840 | Not Available | Positive | 1228515 - 1229963 | 53718.6 |
| site-specific integrase | D5071_05845 | Not Available | Positive | 1230004 - 1230978 | 38302.4 |
| Trna-phe | Not Available | Not Available | Positive | 1231212 - 1231287 | Not Available |
| transcriptional regulator | D5071_05855 | Not Available | Negative | 1231414 - 1231989 | 22062.5 |
| protein-disulfide reductase dsbd | D5071_05860 | Not Available | Negative | 1232024 - 1233754 | 62733.9 |
| divalent-cation tolerance protein cuta | D5071_05865 | Not Available | Negative | 1233730 - 1234062 | 12213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
