Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_05770 | Not Available | Positive | 1215055 - 1215498 | 17016.4 |
| hypothetical protein | D5071_05775 | Not Available | Positive | 1215495 - 1215767 | 10134.0 |
| hypothetical protein | D5071_05780 | Not Available | Positive | 1215840 - 1216325 | 18851.4 |
| duf1738 domain-containing protein | D5071_05785 | Not Available | Positive | 1216390 - 1218339 | 72833.8 |
| hypothetical protein | D5071_05790 | Not Available | Positive | 1218413 - 1219306 | 33812.4 |
| hypothetical protein | D5071_05795 | Not Available | Positive | 1219385 - 1220311 | 35813.7 |
| duf2786 domain-containing protein | D5071_05800 | Not Available | Negative | 1220424 - 1221125 | 26636.5 |
| hypothetical protein | D5071_05805 | Not Available | Negative | 1221217 - 1222032 | 31736.3 |
| hypothetical protein | D5071_05810 | Not Available | Negative | 1222182 - 1223342 | 43767.4 |
| hypothetical protein | D5071_05815 | Not Available | Negative | 1223347 - 1223811 | 17879.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
