Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | D5071_05715 | Not Available | Negative | 1205727 - 1206566 | 31558.6 |
| thioesterase | D5071_05720 | Not Available | Negative | 1206603 - 1207340 | 27943.8 |
| histidine phosphatase family protein | D5071_05730 | Not Available | Negative | 1207916 - 1208491 | 20826.0 |
| lyse family translocator | D5071_05735 | Not Available | Positive | 1209388 - 1210014 | 22277.6 |
| trna dihydrouridine(20/20a) synthase dusa | D5071_05740 | Not Available | Positive | 1210236 - 1211258 | 37570.0 |
| envelope stress response protein pspg | D5071_05745 | Not Available | Positive | 1211424 - 1211696 | 10468.3 |
| quinone oxidoreductase | D5071_05750 | Not Available | Negative | 1212108 - 1213091 | 34843.4 |
| hypothetical protein | D5071_05755 | Not Available | Positive | 1213335 - 1213739 | 15129.6 |
| dna repair protein radc | D5071_05760 | Not Available | Positive | 1214258 - 1214734 | 17892.6 |
| hypothetical protein | D5071_05765 | Not Available | Positive | 1214834 - 1215043 | 7649.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
