Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | D5071_05610 | Not Available | Positive | 1189805 - 1189921 | 3999.57 |
| cold-shock protein cspc | D5071_05615 | Not Available | Positive | 1189963 - 1190172 | 7418.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | D5071_05620 | Not Available | Positive | 1190280 - 1191110 | 30992.1 |
| manganese efflux pump mntp | D5071_05625 | Not Available | Negative | 1191299 - 1191871 | 20269.7 |
| duf986 domain-containing protein | D5071_05630 | Not Available | Negative | 1192297 - 1192755 | 17620.3 |
| pts mannose transporter subunit iid | D5071_05635 | Not Available | Negative | 1192816 - 1193658 | 30779.3 |
| pts mannose/fructose/sorbose transporter subunit iic | D5071_05640 | Not Available | Negative | 1193673 - 1194470 | 27334.3 |
| pts mannose transporter subunit iiab | D5071_05645 | Not Available | Negative | 1194648 - 1195616 | 35008.2 |
| terc family protein | D5071_05650 | Not Available | Positive | 1196190 - 1197746 | 57271.2 |
| l-serine ammonia-lyase | D5071_05655 | Not Available | Negative | 1197860 - 1199224 | 48907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
