Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | D5071_05560 | Not Available | Negative | 1180843 - 1181604 | 27252.9 |
| 5-keto-4-deoxyuronate isomerase | D5071_05565 | Not Available | Negative | 1181688 - 1181834 | 5578.74 |
| cupin domain-containing protein | D5071_05570 | Not Available | Positive | 1182205 - 1182537 | 12489.0 |
| hexitol phosphatase hxpb | D5071_05575 | Not Available | Negative | 1182633 - 1183298 | 24882.1 |
| hypothetical protein | D5071_05580 | Not Available | Positive | 1183602 - 1184150 | 20541.7 |
| fructosamine kinase family protein | D5071_05585 | Not Available | Negative | 1184238 - 1185098 | 33043.0 |
| metal abc transporter permease | D5071_05590 | Not Available | Negative | 1185370 - 1186227 | 30824.3 |
| metal abc transporter permease | D5071_05595 | Not Available | Negative | 1186224 - 1187087 | 30650.5 |
| manganese/iron abc transporter atp-binding protein | D5071_05600 | Not Available | Negative | 1187087 - 1187977 | 32182.6 |
| metal abc transporter substrate-binding protein | D5071_05605 | Not Available | Negative | 1187974 - 1188888 | 33725.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
