Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically-inducible lipoprotein osme | D5071_05510 | Not Available | Positive | 1169699 - 1170028 | 11922.3 |
| l-cystine transporter | D5071_05515 | Not Available | Negative | 1170178 - 1171572 | 48912.3 |
| metal-dependent hydrolase | D5071_05520 | Not Available | Negative | 1171744 - 1172319 | 21519.5 |
| alpha/beta hydrolase | D5071_05525 | Not Available | Negative | 1172400 - 1173353 | 34374.3 |
| porin | D5071_05530 | Not Available | Negative | 1173684 - 1174406 | 27566.1 |
| carbohydrate abc transporter substrate-binding protein | D5071_05535 | Not Available | Negative | 1174654 - 1175946 | 48281.6 |
| abc transporter atp-binding protein | D5071_05540 | Not Available | Negative | 1175962 - 1177089 | 41832.0 |
| carbohydrate abc transporter permease | D5071_05545 | Not Available | Negative | 1177103 - 1178008 | 34168.4 |
| sugar abc transporter permease | D5071_05550 | Not Available | Negative | 1178001 - 1178891 | 33414.0 |
| pectate lyase | D5071_05555 | Not Available | Negative | 1178939 - 1180570 | 62130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
