Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin 2 | D5071_05210 | Not Available | Negative | 1100478 - 1101125 | 24111.1 |
| multidrug efflux mfs transporter mdth | D5071_05215 | Not Available | Negative | 1101308 - 1102513 | 44317.6 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | D5071_05220 | Not Available | Positive | 1102829 - 1103413 | 22782.1 |
| duf480 domain-containing protein | D5071_05225 | Not Available | Positive | 1103423 - 1104055 | 23613.1 |
| gfo/idh/moca family oxidoreductase | D5071_05230 | Not Available | Positive | 1104084 - 1105049 | 35733.4 |
| murein biosynthesis integral membrane protein murj | D5071_05235 | Not Available | Positive | 1105177 - 1106712 | 55896.5 |
| arginine--trna ligase | D5071_05240 | Not Available | Negative | 1106822 - 1108552 | 64198.9 |
| voc family protein | D5071_05245 | Not Available | Positive | 1109210 - 1109758 | 20254.3 |
| copper homeostasis protein cutc | D5071_05250 | Not Available | Positive | 1110238 - 1110996 | 27707.4 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D5071_05255 | Not Available | Negative | 1111153 - 1112139 | 37328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
