Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | D5071_05160 | Not Available | Positive | 1092754 - 1093518 | 28468.7 |
| vitamin b12 abc transporter permease btuc | D5071_05165 | Not Available | Positive | 1093654 - 1094691 | 37672.7 |
| glutathione peroxidase | D5071_05170 | Not Available | Positive | 1094758 - 1095309 | 20810.7 |
| vitamin b12 abc transporter atp-binding protein btud | D5071_05175 | Not Available | Positive | 1095310 - 1096086 | 28177.3 |
| endopeptidase | D5071_05180 | Not Available | Positive | 1096231 - 1096743 | 19463.3 |
| lipoate--protein ligase | D5071_05185 | Not Available | Positive | 1096791 - 1097807 | 37671.4 |
| Trna-ser | Not Available | Not Available | Positive | 1097900 - 1097989 | Not Available |
| phosphatase | D5071_05195 | Not Available | Positive | 1098256 - 1098993 | 27182.4 |
| molecular chaperone | D5071_05200 | Not Available | Positive | 1099055 - 1099633 | 21584.1 |
| lipoprotein | D5071_05205 | Not Available | Negative | 1099712 - 1100278 | 20666.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
