Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine nucleoside phosphoramidase | D5071_05060 | Not Available | Positive | 1071212 - 1071562 | 12812.6 |
| duf1425 domain-containing protein | D5071_05065 | Not Available | Positive | 1071632 - 1072012 | 13835.6 |
| penicillin-binding protein activator lpob | D5071_05070 | Not Available | Positive | 1072034 - 1072615 | 20209.3 |
| thiamine kinase | D5071_05075 | Not Available | Positive | 1072596 - 1073480 | 34623.1 |
| beta-n-acetylhexosaminidase | D5071_05080 | Not Available | Positive | 1073571 - 1074590 | 37485.7 |
| alpha/beta hydrolase | D5071_05085 | Not Available | Positive | 1074753 - 1075295 | 20896.1 |
| nad(p)/fad-dependent oxidoreductase | D5071_05090 | Not Available | Positive | 1075662 - 1076966 | 47326.4 |
| glycine zipper 2tm domain-containing protein | D5071_05095 | Not Available | Positive | 1077426 - 1077965 | 18902.6 |
| mfs transporter | D5071_05100 | Not Available | Negative | 1078066 - 1079259 | 40604.2 |
| mfs transporter | D5071_05105 | Not Available | Negative | 1079301 - 1080509 | 41798.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
