Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | D5071_04960 | Not Available | Negative | 1050510 - 1053857 | 122895.0 |
| duf2655 domain-containing protein | D5071_04965 | Not Available | Positive | 1054039 - 1054260 | 8134.07 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | D5071_04970 | Not Available | Positive | 1054452 - 1055408 | 35901.5 |
| septum formation inhibitor maf | D5071_04975 | Not Available | Negative | 1055486 - 1056070 | 21258.6 |
| 23s rrna accumulation protein yced | D5071_04980 | Not Available | Positive | 1056211 - 1056732 | 19088.7 |
| 50s ribosomal protein l32 | D5071_04985 | Not Available | Positive | 1056749 - 1056919 | 6290.53 |
| phosphate acyltransferase plsx | D5071_04990 | Not Available | Positive | 1056949 - 1057995 | 37139.6 |
| ketoacyl-acp synthase iii | D5071_04995 | Not Available | Positive | 1058002 - 1058955 | 34011.6 |
| [acyl-carrier-protein] s-malonyltransferase | D5071_05000 | Not Available | Positive | 1058973 - 1059902 | 32594.2 |
| 3-oxoacyl-acp reductase fabg | D5071_05005 | Not Available | Positive | 1059917 - 1060651 | 25736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
