Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | D5071_04910 | Not Available | Negative | 1042504 - 1043424 | 35314.4 |
| nadh:flavin oxidoreductase/nadh oxidase | D5071_04915 | Not Available | Negative | 1043683 - 1044777 | 39498.0 |
| rhodanese-related sulfurtransferase | D5071_04920 | Not Available | Positive | 1044994 - 1046061 | 40384.1 |
| ycei family protein | D5071_04925 | Not Available | Negative | 1046135 - 1046713 | 21177.8 |
| cytochrome b | D5071_04930 | Not Available | Negative | 1046740 - 1047294 | 20515.4 |
| biofilm formation regulator bsss | D5071_04935 | Not Available | Negative | 1047754 - 1048008 | 9625.28 |
| hypothetical protein | D5071_04940 | Not Available | Negative | 1048242 - 1048499 | 9498.48 |
| dna damage-inducible protein i | D5071_04945 | Not Available | Negative | 1048588 - 1048827 | 8995.67 |
| dihydroorotase | D5071_04950 | Not Available | Negative | 1048934 - 1049977 | 38605.3 |
| antibiotic biosynthesis monooxygenase | D5071_04955 | Not Available | Positive | 1050162 - 1050449 | 10690.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
